PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00191.50
Common NameJCGZ_26879, LOC105630378
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 288aa    MW: 32121.5 Da    PI: 6.631
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00191.50genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.7e-2066115255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a++ a++k++g
  Jcr4S00191.50  66 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDTAALKFKG 115
                    7********.**********94....45************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-3265124IPR001471AP2/ERF domain
PfamPF008477.5E-1366115IPR001471AP2/ERF domain
PROSITE profilePS5103225.14666123IPR001471AP2/ERF domain
SMARTSM003801.3E-3766129IPR001471AP2/ERF domain
CDDcd000186.97E-2566124No hitNo description
SuperFamilySSF541712.62E-2266124IPR016177DNA-binding domain
PRINTSPR003672.0E-116778IPR001471AP2/ERF domain
PRINTSPR003672.0E-1189105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MMQGKRPFSC DVSSSNELGE EDHHISNTHQ PYLDQAQSVN LESGRIEHRS SQPANDDHQG  60
NIKRRHYRGV RQRPWGKWAA EIRDPKKAAR VWLGTFDTAE AAAIAYDTAA LKFKGSKAKL  120
NFPERVQVPS GSHNNLGLLP TTNQNSLLLF PNNSNYNVIS PPPPLPPLPP LPPPSVPLLP  180
LTPQEAFPNL FQYAQLLCSN DDSYLQYAAA SGLYDNNTSS NLWMSSLSSY SSSSSSSSSS  240
IAPQQQREED FLRFSPQMPA SGFSSDYWSN NSYFLDQERD FDNISPKK
3D Structure ? help Back to Top